Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ08992.1 | AKJ09507.1 | ABB07_02815 | ABB07_05560 | Phosphodiesterase. | Hypothetical protein. | 0.733 |
AKJ09507.1 | AKJ08992.1 | ABB07_05560 | ABB07_02815 | Hypothetical protein. | Phosphodiesterase. | 0.733 |
AKJ09507.1 | AKJ10118.1 | ABB07_05560 | ABB07_08800 | Hypothetical protein. | Methyltransferase. | 0.627 |
AKJ09507.1 | AKJ14415.1 | ABB07_05560 | ABB07_31490 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate. | 0.762 |
AKJ09507.1 | dcd | ABB07_05560 | ABB07_18170 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.621 |
AKJ09507.1 | dut | ABB07_05560 | ABB07_09420 | Hypothetical protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.671 |
AKJ09507.1 | folE | ABB07_05560 | ABB07_17120 | Hypothetical protein. | GTP cyclohydrolase. | 0.697 |
AKJ09507.1 | guaA | ABB07_05560 | ABB07_15020 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.865 |
AKJ09507.1 | guaB | ABB07_05560 | ABB07_15105 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.780 |
AKJ09507.1 | purA | ABB07_05560 | ABB07_17825 | Hypothetical protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.652 |
AKJ09507.1 | rph | ABB07_05560 | ABB07_23455 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.627 |
AKJ10118.1 | AKJ09507.1 | ABB07_08800 | ABB07_05560 | Methyltransferase. | Hypothetical protein. | 0.627 |
AKJ10118.1 | dcd | ABB07_08800 | ABB07_18170 | Methyltransferase. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.885 |
AKJ10118.1 | dut | ABB07_08800 | ABB07_09420 | Methyltransferase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.977 |
AKJ10118.1 | guaA | ABB07_08800 | ABB07_15020 | Methyltransferase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.486 |
AKJ10118.1 | guaB | ABB07_08800 | ABB07_15105 | Methyltransferase. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.481 |
AKJ10118.1 | rph | ABB07_08800 | ABB07_23455 | Methyltransferase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.680 |
AKJ14415.1 | AKJ09507.1 | ABB07_31490 | ABB07_05560 | Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate. | Hypothetical protein. | 0.762 |
AKJ14415.1 | guaA | ABB07_31490 | ABB07_15020 | Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.999 |
AKJ14415.1 | guaB | ABB07_31490 | ABB07_15105 | Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.950 |
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