Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ10330.1 | AKJ10341.1 | ABB07_09960 | ABB07_10015 | Hypothetical protein. | Hypothetical protein. | 0.576 |
AKJ10330.1 | miaB | ABB07_09960 | ABB07_09965 | Hypothetical protein. | (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.576 |
AKJ10340.1 | AKJ10341.1 | ABB07_10010 | ABB07_10015 | Hypothetical protein. | Hypothetical protein. | 0.609 |
AKJ10340.1 | miaB | ABB07_10010 | ABB07_09965 | Hypothetical protein. | (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.519 |
AKJ10341.1 | AKJ10330.1 | ABB07_10015 | ABB07_09960 | Hypothetical protein. | Hypothetical protein. | 0.576 |
AKJ10341.1 | AKJ10340.1 | ABB07_10015 | ABB07_10010 | Hypothetical protein. | Hypothetical protein. | 0.609 |
AKJ10341.1 | AKJ10342.1 | ABB07_10015 | ABB07_10020 | Hypothetical protein. | Histidine kinase. | 0.418 |
AKJ10341.1 | AKJ10370.1 | ABB07_10015 | ABB07_10165 | Hypothetical protein. | Histidine kinase. | 0.684 |
AKJ10341.1 | AKJ12702.1 | ABB07_10015 | ABB07_22530 | Hypothetical protein. | Hypothetical protein. | 0.558 |
AKJ10341.1 | AKJ15201.1 | ABB07_10015 | ABB07_35620 | Hypothetical protein. | Membrane protein. | 0.558 |
AKJ10341.1 | miaB | ABB07_10015 | ABB07_09965 | Hypothetical protein. | (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.576 |
AKJ10342.1 | AKJ10341.1 | ABB07_10020 | ABB07_10015 | Histidine kinase. | Hypothetical protein. | 0.418 |
AKJ10342.1 | AKJ10370.1 | ABB07_10020 | ABB07_10165 | Histidine kinase. | Histidine kinase. | 0.979 |
AKJ10370.1 | AKJ10341.1 | ABB07_10165 | ABB07_10015 | Histidine kinase. | Hypothetical protein. | 0.684 |
AKJ10370.1 | AKJ10342.1 | ABB07_10165 | ABB07_10020 | Histidine kinase. | Histidine kinase. | 0.979 |
AKJ10370.1 | AKJ12702.1 | ABB07_10165 | ABB07_22530 | Histidine kinase. | Hypothetical protein. | 0.981 |
AKJ10370.1 | AKJ15201.1 | ABB07_10165 | ABB07_35620 | Histidine kinase. | Membrane protein. | 0.984 |
AKJ10370.1 | miaB | ABB07_10165 | ABB07_09965 | Histidine kinase. | (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.637 |
AKJ12702.1 | AKJ10341.1 | ABB07_22530 | ABB07_10015 | Hypothetical protein. | Hypothetical protein. | 0.558 |
AKJ12702.1 | AKJ10370.1 | ABB07_22530 | ABB07_10165 | Hypothetical protein. | Histidine kinase. | 0.981 |
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