STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ10386.1Membrane protein. (502 aa)    
Predicted Functional Partners:
AKJ10387.1
Secretion protein EccC.
 
 
 0.966
AKJ10404.1
Type VII secretion protein EccB.
 
 
   0.881
AKJ11769.1
Cell division protein FtsK.
 
 
 0.866
AKJ10405.1
Type VII secretion protein EccE.
 
   
 0.817
AKJ10406.1
Hypothetical protein.
 
     0.772
AKJ12807.1
Hypothetical protein.
  
 
 0.737
AKJ10368.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.726
AKJ10797.1
Cell division protein FtsK.
  
 
 0.726
AKJ12150.1
Plasmid transfer protein.
  
 
 0.726
AKJ14466.1
Membrane protein.
  
 
 0.726
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.