Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ10627.1 | AKJ10628.1 | ABB07_11570 | ABB07_11575 | Membrane protein. | GCN5 family acetyltransferase. | 0.834 |
AKJ10627.1 | AKJ10629.1 | ABB07_11570 | ABB07_11580 | Membrane protein. | Membrane protein. | 0.713 |
AKJ10627.1 | AKJ10631.1 | ABB07_11570 | ABB07_11590 | Membrane protein. | Membrane protein. | 0.709 |
AKJ10627.1 | gatA | ABB07_11570 | ABB07_11595 | Membrane protein. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.709 |
AKJ10627.1 | gatB | ABB07_11570 | ABB07_11585 | Membrane protein. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.714 |
AKJ10627.1 | gatC | ABB07_11570 | ABB07_11600 | Membrane protein. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.709 |
AKJ10628.1 | AKJ10627.1 | ABB07_11575 | ABB07_11570 | GCN5 family acetyltransferase. | Membrane protein. | 0.834 |
AKJ10628.1 | AKJ10629.1 | ABB07_11575 | ABB07_11580 | GCN5 family acetyltransferase. | Membrane protein. | 0.831 |
AKJ10628.1 | AKJ10631.1 | ABB07_11575 | ABB07_11590 | GCN5 family acetyltransferase. | Membrane protein. | 0.697 |
AKJ10628.1 | gatA | ABB07_11575 | ABB07_11595 | GCN5 family acetyltransferase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.772 |
AKJ10628.1 | gatB | ABB07_11575 | ABB07_11585 | GCN5 family acetyltransferase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.824 |
AKJ10628.1 | gatC | ABB07_11575 | ABB07_11600 | GCN5 family acetyltransferase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.697 |
AKJ10629.1 | AKJ10627.1 | ABB07_11580 | ABB07_11570 | Membrane protein. | Membrane protein. | 0.713 |
AKJ10629.1 | AKJ10628.1 | ABB07_11580 | ABB07_11575 | Membrane protein. | GCN5 family acetyltransferase. | 0.831 |
AKJ10629.1 | AKJ10631.1 | ABB07_11580 | ABB07_11590 | Membrane protein. | Membrane protein. | 0.488 |
AKJ10629.1 | AKJ12000.1 | ABB07_11580 | ABB07_18750 | Membrane protein. | Serine/threonine protein kinase. | 0.433 |
AKJ10629.1 | AKJ12001.1 | ABB07_11580 | ABB07_18755 | Membrane protein. | Serine/threonine protein kinase. | 0.433 |
AKJ10629.1 | AKJ12032.1 | ABB07_11580 | ABB07_18920 | Membrane protein. | Serine/threonine protein kinase. | 0.433 |
AKJ10629.1 | AKJ13701.1 | ABB07_11580 | ABB07_27790 | Membrane protein. | Serine/threonine protein kinase. | 0.433 |
AKJ10629.1 | gatA | ABB07_11580 | ABB07_11595 | Membrane protein. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.489 |
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