STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ10734.1Ser or Arg-related nuclear matrix protein. (269 aa)    
Predicted Functional Partners:
AKJ10732.1
Hypothetical protein.
 
     0.970
AKJ10733.1
Hypothetical protein.
 
    
0.912
AKJ10735.1
MarR family transcriptional regulator.
       0.786
AKJ10730.1
Hypothetical protein.
       0.779
AKJ10731.1
Membrane protein.
       0.779
AKJ10926.1
Hypothetical protein.
  
     0.762
AKJ10927.1
Hypothetical protein.
  
     0.759
AKJ15082.1
Hypothetical protein.
  
     0.756
AKJ13455.1
Membrane protein.
  
     0.753
AKJ10729.1
Membrane protein YndG.
       0.714
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.