STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ10875.1Lyase. (138 aa)    
Predicted Functional Partners:
AKJ10874.1
AraC family transcriptional regulator.
 
     0.938
AKJ10876.1
Hypothetical protein.
       0.812
AKJ12330.1
Daunorubicin resistance protein DrrC.
 
     0.648
AKJ11663.1
AraC family transcriptional regulator.
 
     0.610
AKJ09575.1
Urea carboxylase.
   
 
  0.448
AKJ10863.1
Superoxide dismutase.
       0.445
AKJ08630.1
Deaminase.
 
     0.424
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.