STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ11240.1Glycine/betaine ABC transporter permease. (621 aa)    
Predicted Functional Partners:
AKJ11241.1
Glycine/betaine ABC transporter ATP-binding protein.
 0.999
AKJ15341.1
Glycine/betaine ABC transporter ATP-binding protein.
 0.999
AKJ11239.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 
 0.997
AKJ15343.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 
 0.990
AKJ09984.1
ABC transporter permease.
 
 
  0.735
AKJ09744.1
Hypothetical protein.
 
 
  0.710
AKJ11242.1
Oxidoreductase.
 
   
 0.683
AKJ09745.1
Hypothetical protein.
 
 
  0.644
AKJ11243.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.571
AKJ09983.1
ABC transporter permease.
 
 
 
0.499
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.