Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09668.1 | AKJ11271.1 | ABB07_06430 | ABB07_14920 | Adenylosuccinate lyase. | Hypothetical protein. | 0.963 |
AKJ09668.1 | AKJ14193.1 | ABB07_06430 | ABB07_30330 | Adenylosuccinate lyase. | Phosphatidylinositol kinase. | 0.838 |
AKJ09668.1 | rpoA | ABB07_06430 | ABB07_15420 | Adenylosuccinate lyase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.886 |
AKJ09668.1 | rpoB | ABB07_06430 | ABB07_15720 | Adenylosuccinate lyase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.876 |
AKJ09668.1 | rpoZ | ABB07_06430 | ABB07_31420 | Adenylosuccinate lyase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.896 |
AKJ10465.1 | AKJ11271.1 | ABB07_10670 | ABB07_14920 | WD40 repeat-containing protein. | Hypothetical protein. | 0.966 |
AKJ10465.1 | AKJ14193.1 | ABB07_10670 | ABB07_30330 | WD40 repeat-containing protein. | Phosphatidylinositol kinase. | 0.838 |
AKJ10465.1 | rpoA | ABB07_10670 | ABB07_15420 | WD40 repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.853 |
AKJ10465.1 | rpoB | ABB07_10670 | ABB07_15720 | WD40 repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.849 |
AKJ10465.1 | rpoZ | ABB07_10670 | ABB07_31420 | WD40 repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.852 |
AKJ10472.1 | AKJ11271.1 | ABB07_10710 | ABB07_14920 | Hypothetical protein. | Hypothetical protein. | 0.960 |
AKJ10472.1 | AKJ14193.1 | ABB07_10710 | ABB07_30330 | Hypothetical protein. | Phosphatidylinositol kinase. | 0.838 |
AKJ10472.1 | rpoA | ABB07_10710 | ABB07_15420 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.850 |
AKJ10472.1 | rpoB | ABB07_10710 | ABB07_15720 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.842 |
AKJ10472.1 | rpoZ | ABB07_10710 | ABB07_31420 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.852 |
AKJ11271.1 | AKJ09668.1 | ABB07_14920 | ABB07_06430 | Hypothetical protein. | Adenylosuccinate lyase. | 0.963 |
AKJ11271.1 | AKJ10465.1 | ABB07_14920 | ABB07_10670 | Hypothetical protein. | WD40 repeat-containing protein. | 0.966 |
AKJ11271.1 | AKJ10472.1 | ABB07_14920 | ABB07_10710 | Hypothetical protein. | Hypothetical protein. | 0.960 |
AKJ11271.1 | AKJ11611.1 | ABB07_14920 | ABB07_16695 | Hypothetical protein. | Hypothetical protein. | 0.960 |
AKJ11271.1 | AKJ13928.1 | ABB07_14920 | ABB07_28970 | Hypothetical protein. | Hypothetical protein. | 0.967 |
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