STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ11469.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
AKJ11470.1
Hypothetical protein.
       0.790
AKJ11468.1
Quinone oxidoreductase.
       0.776
AKJ11467.1
Transcriptional regulator.
       0.719
AKJ11465.1
LuxR family transcriptional regulator.
       0.576
AKJ11466.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
       0.576
AKJ10766.1
Secreted/membrane protein.
      
 0.574
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.