STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ11524.1DNA-binding protein. (284 aa)    
Predicted Functional Partners:
AKJ11523.1
Toxin.
 
     0.919
AKJ13844.1
AbaA.
  
     0.767
AKJ11711.1
Regulator.
 
     0.766
AKJ09184.1
Hypothetical protein.
  
     0.754
AKJ10753.1
Hypothetical protein.
 
     0.754
AKJ08915.1
Methyltransferase.
  
     0.753
AKJ08967.1
Translation initiation factor IF-2.
  
     0.747
AKJ09613.1
Methyltransferase.
  
     0.747
AKJ08912.1
Methyltransferase.
  
     0.743
AKJ09349.1
Methyltransferase.
  
     0.743
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.