Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ10708.1 | AKJ11529.1 | ABB07_12000 | ABB07_16270 | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | TetR family transcriptional regulator. | 0.576 |
AKJ10708.1 | AKJ11530.1 | ABB07_12000 | ABB07_16275 | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Membrane protein. | 0.576 |
AKJ10708.1 | AKJ11531.1 | ABB07_12000 | ABB07_16280 | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Acetyltransferase. | 0.519 |
AKJ10708.1 | mqnE | ABB07_12000 | ABB07_16290 | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Radical SAM protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.525 |
AKJ11529.1 | AKJ10708.1 | ABB07_16270 | ABB07_12000 | TetR family transcriptional regulator. | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.576 |
AKJ11529.1 | AKJ11530.1 | ABB07_16270 | ABB07_16275 | TetR family transcriptional regulator. | Membrane protein. | 0.822 |
AKJ11529.1 | AKJ11531.1 | ABB07_16270 | ABB07_16280 | TetR family transcriptional regulator. | Acetyltransferase. | 0.757 |
AKJ11529.1 | AKJ11532.1 | ABB07_16270 | ABB07_16285 | TetR family transcriptional regulator. | DNA polymerase. | 0.749 |
AKJ11529.1 | AKJ11534.1 | ABB07_16270 | ABB07_16295 | TetR family transcriptional regulator. | AsnC family transcriptional regulator. | 0.446 |
AKJ11529.1 | mqnE | ABB07_16270 | ABB07_16290 | TetR family transcriptional regulator. | Radical SAM protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.456 |
AKJ11530.1 | AKJ10708.1 | ABB07_16275 | ABB07_12000 | Membrane protein. | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.576 |
AKJ11530.1 | AKJ11529.1 | ABB07_16275 | ABB07_16270 | Membrane protein. | TetR family transcriptional regulator. | 0.822 |
AKJ11530.1 | AKJ11531.1 | ABB07_16275 | ABB07_16280 | Membrane protein. | Acetyltransferase. | 0.798 |
AKJ11530.1 | AKJ11532.1 | ABB07_16275 | ABB07_16285 | Membrane protein. | DNA polymerase. | 0.789 |
AKJ11530.1 | AKJ11534.1 | ABB07_16275 | ABB07_16295 | Membrane protein. | AsnC family transcriptional regulator. | 0.686 |
AKJ11530.1 | mqnE | ABB07_16275 | ABB07_16290 | Membrane protein. | Radical SAM protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.704 |
AKJ11530.1 | ubiX | ABB07_16275 | ABB07_16300 | Membrane protein. | Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.662 |
AKJ11531.1 | AKJ10708.1 | ABB07_16280 | ABB07_12000 | Acetyltransferase. | Involved in the transport of C4-dicarboxylates across the membrane; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.519 |
AKJ11531.1 | AKJ11529.1 | ABB07_16280 | ABB07_16270 | Acetyltransferase. | TetR family transcriptional regulator. | 0.757 |
AKJ11531.1 | AKJ11530.1 | ABB07_16280 | ABB07_16275 | Acetyltransferase. | Membrane protein. | 0.798 |
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