STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ11739.1Secretion protein. (401 aa)    
Predicted Functional Partners:
AKJ11738.1
Membrane protein.
  
  
 0.954
AKJ11088.1
Membrane protein.
 
  
 0.923
AKJ11737.1
Membrane protein.
 
  
 0.921
AKJ11089.1
Membrane protein.
 
  
 0.909
AKJ11740.1
Septum formation initiator.
       0.876
AKJ11093.1
Septum formation initiator.
 
  
 0.842
AKJ11736.1
Membrane protein.
     
 0.806
AKJ11735.1
Membrane protein.
       0.681
AKJ11094.1
Pilus assembly protein CpaB.
  
  
 0.572
AKJ11091.1
Septum formation initiator.
  
  
 0.559
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.