Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ11761.1 | AKJ13788.1 | ABB07_17465 | ABB07_28235 | glutamyl-tRNA amidotransferase. | Glutamate synthase. | 0.865 |
AKJ11761.1 | carA | ABB07_17465 | ABB07_31390 | glutamyl-tRNA amidotransferase. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.836 |
AKJ11761.1 | carB | ABB07_17465 | ABB07_31395 | glutamyl-tRNA amidotransferase. | Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Belongs to the CarB family. | 0.836 |
AKJ11761.1 | gatA | ABB07_17465 | ABB07_11595 | glutamyl-tRNA amidotransferase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.825 |
AKJ11761.1 | gatB | ABB07_17465 | ABB07_11585 | glutamyl-tRNA amidotransferase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.851 |
AKJ11761.1 | gltX | ABB07_17465 | ABB07_11315 | glutamyl-tRNA amidotransferase. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.876 |
AKJ11761.1 | guaA | ABB07_17465 | ABB07_15020 | glutamyl-tRNA amidotransferase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.851 |
AKJ11761.1 | hisF | ABB07_17465 | ABB07_28120 | glutamyl-tRNA amidotransferase. | Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.833 |
AKJ11761.1 | hisH | ABB07_17465 | ABB07_28105 | glutamyl-tRNA amidotransferase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.830 |
AKJ11761.1 | pyrG | ABB07_17465 | ABB07_29675 | glutamyl-tRNA amidotransferase. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.822 |
AKJ13788.1 | AKJ11761.1 | ABB07_28235 | ABB07_17465 | Glutamate synthase. | glutamyl-tRNA amidotransferase. | 0.865 |
AKJ13788.1 | carA | ABB07_28235 | ABB07_31390 | Glutamate synthase. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.963 |
AKJ13788.1 | carB | ABB07_28235 | ABB07_31395 | Glutamate synthase. | Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Belongs to the CarB family. | 0.987 |
AKJ13788.1 | gatA | ABB07_28235 | ABB07_11595 | Glutamate synthase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.918 |
AKJ13788.1 | gatB | ABB07_28235 | ABB07_11585 | Glutamate synthase. | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.926 |
AKJ13788.1 | gltX | ABB07_28235 | ABB07_11315 | Glutamate synthase. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.975 |
AKJ13788.1 | guaA | ABB07_28235 | ABB07_15020 | Glutamate synthase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.996 |
AKJ13788.1 | hisF | ABB07_28235 | ABB07_28120 | Glutamate synthase. | Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.973 |
AKJ13788.1 | hisH | ABB07_28235 | ABB07_28105 | Glutamate synthase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.961 |
AKJ13788.1 | pyrG | ABB07_28235 | ABB07_29675 | Glutamate synthase. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.966 |
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