STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ11782.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (357 aa)    
Predicted Functional Partners:
AKJ11781.1
ABC transporter ATP-binding protein.
 
 0.999
AKJ11783.1
ABC transporter substrate-binding protein.
 
 0.999
AKJ14055.1
ABC transporter.
 
 0.999
AKJ13014.1
ABC transporter substrate-binding protein.
  
 0.987
AKJ14246.1
ABC transporter substrate-binding protein.
 
 0.970
AKJ14054.1
Membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.827
AKJ14053.1
Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 
0.794
AKJ11780.1
MFS transporter.
       0.607
AKJ11778.1
Cytochrome P450.
       0.586
AKJ11784.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.548
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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