STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ11839.1LuxR family transcriptional regulator. (221 aa)    
Predicted Functional Partners:
AKJ10370.1
Histidine kinase.
  
 0.988
AKJ11840.1
ATPase.
 
 0.971
AKJ11842.1
Histidine kinase.
 
 0.947
AKJ11683.1
Histidine kinase.
 0.880
AKJ11251.1
ATPase.
 0.876
AKJ14039.1
Diguanylate cyclase.
  0.874
AKJ08626.1
Hypothetical protein.
 
  0.868
AKJ13295.1
Histidine kinase.
  
  0.867
AKJ14799.1
Histidine kinase.
  
  0.867
AKJ13651.1
Histidine kinase.
  
  0.863
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.