STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ12021.1Phenylacetic acid degradation protein. (354 aa)    
Predicted Functional Partners:
AKJ12017.1
phenylacetate-CoA oxygenase.
 
 0.998
AKJ12019.1
Phenylacetic acid degradation protein.
 
 0.998
AKJ12020.1
Phenylacetic acid degradation protein PaaD.
 
 
 0.998
paaB
phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation.
 
 
 0.997
AKJ09086.1
P450 reductase.
  
 0.995
AKJ15595.1
Polyketide synthase.
  
 0.987
AKJ14568.1
Hypothetical protein.
  
 0.984
AKJ09716.1
Hypothetical protein.
   
 0.981
AKJ14994.1
phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.980
AKJ08733.1
Reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.973
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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