STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ12271.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
AKJ12273.1
Peptidase P60.
  
    0.587
AKJ12090.1
Multidrug transporter MatE.
       0.576
AKJ11233.1
Membrane protein.
  
     0.540
AKJ11924.1
Cyclase.
  
     0.432
AKJ15108.1
Membrane protein.
  
     0.425
AKJ12085.1
Membrane protein.
  
     0.424
AKJ13023.1
Hypothetical protein.
  
     0.422
AKJ11937.1
Hypothetical protein.
  
     0.419
AKJ12268.1
Hypothetical protein.
       0.411
AKJ12269.1
Hypothetical protein.
       0.411
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.