STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ12373.1FAD-dependent oxidoreductase. (394 aa)    
Predicted Functional Partners:
AKJ12374.1
Pentapeptide repeat protein.
 
     0.798
AKJ09388.1
Phytoene synthase.
  
 
 0.783
AKJ09389.1
Squalene synthase.
  
 
 0.783
AKJ12372.1
Oxidoreductase.
    
 0.678
AKJ13984.1
Magnesium chelatase.
  
 
 0.668
AKJ15177.1
Hypothetical protein.
  
 
 0.613
AKJ15595.1
Polyketide synthase.
    
 0.609
AKJ09415.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.591
AKJ10025.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.591
AKJ10833.1
Oxygenase.
 
 
 0.589
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.