STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ12459.1TetR family transcriptional regulator. (206 aa)    
Predicted Functional Partners:
AKJ12453.1
Exopolyphosphatase.
 
     0.936
AKJ12452.1
Wyosine base formation domain-containing protein.
 
     0.909
AKJ12456.1
acyl-CoA dehydrogenase.
 
     0.908
AKJ12457.1
Hypothetical protein.
       0.876
AKJ12458.1
enoyl-CoA hydratase.
       0.876
AKJ12454.1
acetyl-CoA carboxylase.
 
     0.861
AKJ12455.1
acetyl-CoA carboxylase subunit alpha.
   
   0.745
AKJ12460.1
Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.494
AKJ09418.1
Saccharopine dehydrogenase.
  
     0.478
AKJ12598.1
MerR family transcriptional regulator.
  
     0.450
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.