STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ12467.1Transporter. (528 aa)    
Predicted Functional Partners:
AKJ12468.1
ABC transporter ATP-binding protein.
 
  
 0.968
AKJ10370.1
Histidine kinase.
  
 0.909
AKJ12469.1
DNA primase.
 
     0.828
AKJ11283.1
Membrane protein.
 
  
 0.755
AKJ12471.1
Hypothetical protein.
 
     0.715
AKJ10482.1
Hypothetical protein.
  
     0.654
AKJ10053.1
Sugar hydrolase.
  
  
  0.629
AKJ11196.1
Hypothetical protein.
  
     0.622
AKJ13425.1
Lipoprotein.
  
     0.621
AKJ14740.1
Membrane protein.
  
     0.620
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.