STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ12596.1Acetyltransferase. (158 aa)    
Predicted Functional Partners:
AKJ12597.1
Exodeoxyribonuclease III.
 
     0.819
AKJ11345.1
Peptidase M22.
  
 0.542
AKJ13468.1
Acetyltransferase.
  
     0.542
AKJ09575.1
Urea carboxylase.
   
  0.528
AKJ12749.1
Cysteine dioxygenase.
  
  
  0.512
ureAB
Urease subunit gamma; In the C-terminal section; belongs to the urease beta subunit family.
  
 
  0.459
AKJ10349.1
Cysteine dioxygenase.
  
  
  0.450
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.433
AKJ14668.1
XRE family transcriptional regulator.
  
 
  0.431
AKJ11347.1
ATP-binding protein.
  
 
 0.420
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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