Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09575.1 | AKJ12596.1 | ABB07_05945 | ABB07_21970 | Urea carboxylase. | Acetyltransferase. | 0.528 |
AKJ09575.1 | ureAB | ABB07_05945 | ABB07_11445 | Urea carboxylase. | Urease subunit gamma; In the C-terminal section; belongs to the urease beta subunit family. | 0.913 |
AKJ10349.1 | AKJ12596.1 | ABB07_10055 | ABB07_21970 | Cysteine dioxygenase. | Acetyltransferase. | 0.450 |
AKJ10349.1 | AKJ14668.1 | ABB07_10055 | ABB07_32795 | Cysteine dioxygenase. | XRE family transcriptional regulator. | 0.483 |
AKJ11345.1 | AKJ11347.1 | ABB07_15305 | ABB07_15315 | Peptidase M22. | ATP-binding protein. | 0.999 |
AKJ11345.1 | AKJ12596.1 | ABB07_15305 | ABB07_21970 | Peptidase M22. | Acetyltransferase. | 0.542 |
AKJ11345.1 | tsaD | ABB07_15305 | ABB07_15295 | Peptidase M22. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
AKJ11347.1 | AKJ11345.1 | ABB07_15315 | ABB07_15305 | ATP-binding protein. | Peptidase M22. | 0.999 |
AKJ11347.1 | AKJ12596.1 | ABB07_15315 | ABB07_21970 | ATP-binding protein. | Acetyltransferase. | 0.420 |
AKJ11347.1 | tsaD | ABB07_15315 | ABB07_15295 | ATP-binding protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.998 |
AKJ12596.1 | AKJ09575.1 | ABB07_21970 | ABB07_05945 | Acetyltransferase. | Urea carboxylase. | 0.528 |
AKJ12596.1 | AKJ10349.1 | ABB07_21970 | ABB07_10055 | Acetyltransferase. | Cysteine dioxygenase. | 0.450 |
AKJ12596.1 | AKJ11345.1 | ABB07_21970 | ABB07_15305 | Acetyltransferase. | Peptidase M22. | 0.542 |
AKJ12596.1 | AKJ11347.1 | ABB07_21970 | ABB07_15315 | Acetyltransferase. | ATP-binding protein. | 0.420 |
AKJ12596.1 | AKJ12597.1 | ABB07_21970 | ABB07_21975 | Acetyltransferase. | Exodeoxyribonuclease III. | 0.819 |
AKJ12596.1 | AKJ12749.1 | ABB07_21970 | ABB07_22770 | Acetyltransferase. | Cysteine dioxygenase. | 0.512 |
AKJ12596.1 | AKJ13468.1 | ABB07_21970 | ABB07_26585 | Acetyltransferase. | Acetyltransferase. | 0.542 |
AKJ12596.1 | AKJ14668.1 | ABB07_21970 | ABB07_32795 | Acetyltransferase. | XRE family transcriptional regulator. | 0.431 |
AKJ12596.1 | tsaD | ABB07_21970 | ABB07_15295 | Acetyltransferase. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.433 |
AKJ12596.1 | ureAB | ABB07_21970 | ABB07_11445 | Acetyltransferase. | Urease subunit gamma; In the C-terminal section; belongs to the urease beta subunit family. | 0.459 |
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