Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ10370.1 | AKJ10841.1 | ABB07_10165 | ABB07_12700 | Histidine kinase. | ATPase. | 0.999 |
AKJ10370.1 | AKJ10884.1 | ABB07_10165 | ABB07_12920 | Histidine kinase. | Anti-sigma regulatory factor. | 0.463 |
AKJ10370.1 | AKJ12712.1 | ABB07_10165 | ABB07_22580 | Histidine kinase. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. | 0.763 |
AKJ10370.1 | AKJ12713.1 | ABB07_10165 | ABB07_22585 | Histidine kinase. | Metal ABC transporter substrate-binding protein; Belongs to the anti-sigma-factor antagonist family. | 0.893 |
AKJ10370.1 | AKJ15371.1 | ABB07_10165 | ABB07_36515 | Histidine kinase. | Protein phosphatase. | 0.999 |
AKJ10370.1 | AKJ15537.1 | ABB07_10165 | ABB07_37395 | Histidine kinase. | PAS/PAC sensor protein. | 0.999 |
AKJ10370.1 | rpoA | ABB07_10165 | ABB07_15420 | Histidine kinase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.464 |
AKJ10370.1 | rpoB | ABB07_10165 | ABB07_15720 | Histidine kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.696 |
AKJ10370.1 | rpoC | ABB07_10165 | ABB07_15715 | Histidine kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.537 |
AKJ10841.1 | AKJ10370.1 | ABB07_12700 | ABB07_10165 | ATPase. | Histidine kinase. | 0.999 |
AKJ10841.1 | AKJ10884.1 | ABB07_12700 | ABB07_12920 | ATPase. | Anti-sigma regulatory factor. | 0.422 |
AKJ10841.1 | AKJ12712.1 | ABB07_12700 | ABB07_22580 | ATPase. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. | 0.766 |
AKJ10841.1 | AKJ12713.1 | ABB07_12700 | ABB07_22585 | ATPase. | Metal ABC transporter substrate-binding protein; Belongs to the anti-sigma-factor antagonist family. | 0.977 |
AKJ10841.1 | AKJ15371.1 | ABB07_12700 | ABB07_36515 | ATPase. | Protein phosphatase. | 0.827 |
AKJ10841.1 | AKJ15537.1 | ABB07_12700 | ABB07_37395 | ATPase. | PAS/PAC sensor protein. | 0.826 |
AKJ10884.1 | AKJ10370.1 | ABB07_12920 | ABB07_10165 | Anti-sigma regulatory factor. | Histidine kinase. | 0.463 |
AKJ10884.1 | AKJ10841.1 | ABB07_12920 | ABB07_12700 | Anti-sigma regulatory factor. | ATPase. | 0.422 |
AKJ10884.1 | AKJ12712.1 | ABB07_12920 | ABB07_22580 | Anti-sigma regulatory factor. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. | 0.794 |
AKJ10884.1 | AKJ12713.1 | ABB07_12920 | ABB07_22585 | Anti-sigma regulatory factor. | Metal ABC transporter substrate-binding protein; Belongs to the anti-sigma-factor antagonist family. | 0.623 |
AKJ10884.1 | AKJ15371.1 | ABB07_12920 | ABB07_36515 | Anti-sigma regulatory factor. | Protein phosphatase. | 0.441 |
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