Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09452.1 | AKJ09737.1 | ABB07_05275 | ABB07_06780 | Ferredoxin. | Sulfurase. | 0.718 |
AKJ09452.1 | AKJ10062.1 | ABB07_05275 | ABB07_08505 | Ferredoxin. | 2-aminobenzoate-CoA ligase. | 0.614 |
AKJ09452.1 | AKJ10065.1 | ABB07_05275 | ABB07_08520 | Ferredoxin. | Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA. | 0.844 |
AKJ09452.1 | AKJ12021.1 | ABB07_05275 | ABB07_18855 | Ferredoxin. | Phenylacetic acid degradation protein. | 0.671 |
AKJ09452.1 | AKJ13047.1 | ABB07_05275 | ABB07_24320 | Ferredoxin. | FAD-binding monooxygenase. | 0.695 |
AKJ09452.1 | AKJ13588.1 | ABB07_05275 | ABB07_27205 | Ferredoxin. | Iron-sulfur protein. | 0.646 |
AKJ09452.1 | AKJ14754.1 | ABB07_05275 | ABB07_33255 | Ferredoxin. | Oxidoreductase. | 0.628 |
AKJ09452.1 | fadH | ABB07_05275 | ABB07_34335 | Ferredoxin. | 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA. | 0.960 |
AKJ09737.1 | AKJ09452.1 | ABB07_06780 | ABB07_05275 | Sulfurase. | Ferredoxin. | 0.718 |
AKJ09737.1 | AKJ10062.1 | ABB07_06780 | ABB07_08505 | Sulfurase. | 2-aminobenzoate-CoA ligase. | 0.623 |
AKJ09737.1 | AKJ10065.1 | ABB07_06780 | ABB07_08520 | Sulfurase. | Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA. | 0.855 |
AKJ09737.1 | AKJ12021.1 | ABB07_06780 | ABB07_18855 | Sulfurase. | Phenylacetic acid degradation protein. | 0.739 |
AKJ09737.1 | AKJ13047.1 | ABB07_06780 | ABB07_24320 | Sulfurase. | FAD-binding monooxygenase. | 0.632 |
AKJ09737.1 | AKJ13588.1 | ABB07_06780 | ABB07_27205 | Sulfurase. | Iron-sulfur protein. | 0.731 |
AKJ09737.1 | AKJ14754.1 | ABB07_06780 | ABB07_33255 | Sulfurase. | Oxidoreductase. | 0.640 |
AKJ09737.1 | fadH | ABB07_06780 | ABB07_34335 | Sulfurase. | 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA. | 0.963 |
AKJ10061.1 | AKJ10062.1 | ABB07_08495 | ABB07_08505 | Endoribonuclease L-PSP. | 2-aminobenzoate-CoA ligase. | 0.887 |
AKJ10061.1 | AKJ10065.1 | ABB07_08495 | ABB07_08520 | Endoribonuclease L-PSP. | Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA. | 0.817 |
AKJ10061.1 | AKJ13047.1 | ABB07_08495 | ABB07_24320 | Endoribonuclease L-PSP. | FAD-binding monooxygenase. | 0.772 |
AKJ10062.1 | AKJ09452.1 | ABB07_08505 | ABB07_05275 | 2-aminobenzoate-CoA ligase. | Ferredoxin. | 0.614 |
page 1 of 4