STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ13063.1MarR family transcriptional regulator. (64 aa)    
Predicted Functional Partners:
AKJ13062.1
Acetyltransferase.
       0.814
AKJ13057.1
Copper-transporting ATPase.
     
 0.719
AKJ13065.1
5-dehydro-2-deoxygluconokinase.
       0.576
AKJ13066.1
Deoxyribose-phosphate aldolase.
       0.576
AKJ13067.1
IolB protein.
       0.576
AKJ13068.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
       0.576
AKJ13069.1
Methylmalonate-semialdehyde dehydrogenase.
       0.576
AKJ15012.1
Inositol 2-dehydrogenase.
       0.576
AKJ11473.1
ABC transporter permease.
     
 0.427
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.