Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09696.1 | AKJ09729.1 | ABB07_06575 | ABB07_06740 | Gamma-glutamyltransferase. | Gamma-glutamyltransferase. | 0.920 |
AKJ09696.1 | AKJ13150.1 | ABB07_06575 | ABB07_24890 | Gamma-glutamyltransferase. | Aminopeptidase N. | 0.898 |
AKJ09696.1 | AKJ13164.1 | ABB07_06575 | ABB07_24965 | Gamma-glutamyltransferase. | Aminopeptidase N. | 0.898 |
AKJ09696.1 | AKJ13798.1 | ABB07_06575 | ABB07_28285 | Gamma-glutamyltransferase. | Aminopeptidase N. | 0.898 |
AKJ09696.1 | AKJ15113.1 | ABB07_06575 | ABB07_35155 | Gamma-glutamyltransferase. | Carboxylate--amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.918 |
AKJ09696.1 | AKJ15468.1 | ABB07_06575 | ABB07_37020 | Gamma-glutamyltransferase. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.734 |
AKJ09696.1 | pepA | ABB07_06575 | ABB07_27455 | Gamma-glutamyltransferase. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.915 |
AKJ09729.1 | AKJ09696.1 | ABB07_06740 | ABB07_06575 | Gamma-glutamyltransferase. | Gamma-glutamyltransferase. | 0.920 |
AKJ09729.1 | AKJ13150.1 | ABB07_06740 | ABB07_24890 | Gamma-glutamyltransferase. | Aminopeptidase N. | 0.898 |
AKJ09729.1 | AKJ13164.1 | ABB07_06740 | ABB07_24965 | Gamma-glutamyltransferase. | Aminopeptidase N. | 0.898 |
AKJ09729.1 | AKJ13798.1 | ABB07_06740 | ABB07_28285 | Gamma-glutamyltransferase. | Aminopeptidase N. | 0.898 |
AKJ09729.1 | AKJ15113.1 | ABB07_06740 | ABB07_35155 | Gamma-glutamyltransferase. | Carboxylate--amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.918 |
AKJ09729.1 | AKJ15468.1 | ABB07_06740 | ABB07_37020 | Gamma-glutamyltransferase. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.805 |
AKJ09729.1 | pepA | ABB07_06740 | ABB07_27455 | Gamma-glutamyltransferase. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.926 |
AKJ11433.1 | AKJ13150.1 | ABB07_15765 | ABB07_24890 | Aspartate aminotransferase. | Aminopeptidase N. | 0.911 |
AKJ11433.1 | pepA | ABB07_15765 | ABB07_27455 | Aspartate aminotransferase. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.908 |
AKJ13149.1 | AKJ13150.1 | ABB07_24885 | ABB07_24890 | Hypothetical protein. | Aminopeptidase N. | 0.786 |
AKJ13150.1 | AKJ09696.1 | ABB07_24890 | ABB07_06575 | Aminopeptidase N. | Gamma-glutamyltransferase. | 0.898 |
AKJ13150.1 | AKJ09729.1 | ABB07_24890 | ABB07_06740 | Aminopeptidase N. | Gamma-glutamyltransferase. | 0.898 |
AKJ13150.1 | AKJ11433.1 | ABB07_24890 | ABB07_15765 | Aminopeptidase N. | Aspartate aminotransferase. | 0.911 |
page 1 of 4