STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ13181.1Membrane protein. (410 aa)    
Predicted Functional Partners:
AKJ11883.1
Glycosyl transferase.
  
  
 0.906
AKJ15405.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.906
AKJ14280.1
Hypothetical protein.
 
  
 0.682
AKJ15413.1
O-antigen polymerase.
  
    0.605
AKJ10968.1
NYN domain containing protein.
  
     0.587
AKJ13182.1
Membrane protein.
       0.576
AKJ11404.1
Hypothetical protein.
 
 
  0.546
AKJ13543.1
Hypothetical protein.
  
     0.545
AKJ14742.1
Hypothetical protein.
  
     0.542
AKJ09396.1
Transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.540
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.