STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ13337.1Sugar ABC transporter permease. (300 aa)    
Predicted Functional Partners:
AKJ13338.1
Sugar ABC transporter permease.
 
  0.993
AKJ13336.1
Sugar ABC transporter substrate-binding protein.
 
  0.992
AKJ09913.1
Sugar ABC transporter permease.
  0.970
AKJ12365.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.968
AKJ09911.1
Sugar ABC transporter substrate-binding protein.
 
  0.966
AKJ15155.1
Sugar ABC transporter permease.
  0.965
AKJ14144.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.961
AKJ09455.1
ABC transporter permease.
 
  0.945
AKJ10055.1
Sugar ABC transporter permease.
  0.945
AKJ09212.1
ABC transporter permease.
  0.944
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.