STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ13435.1Acetyltransferase. (158 aa)    
Predicted Functional Partners:
AKJ13436.1
MerR family transcriptional regulator.
       0.791
AKJ13434.1
Beta-lactamase.
       0.747
AKJ13437.1
Aldo/keto reductase.
       0.585
AKJ14582.1
CoA-binding protein.
  
    0.578
AKJ13433.1
Serine/threonine protein kinase.
       0.572
AKJ09518.1
Hypothetical protein.
  
     0.550
AKJ11345.1
Peptidase M22.
  
 0.542
AKJ09575.1
Urea carboxylase.
   
  0.528
ureAB
Urease subunit gamma; In the C-terminal section; belongs to the urease beta subunit family.
  
 
  0.459
AKJ09876.1
Transcriptional regulator.
  
     0.452
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.