STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ13948.1GntR family transcriptional regulator. (230 aa)    
Predicted Functional Partners:
AKJ13949.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.913
AKJ13950.1
Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Belongs to the IlvD/Edd family.
 
     0.892
AKJ13931.1
GntR family transcriptional regulator.
  
     0.770
AKJ13947.1
Beta-lactamase.
       0.764
AKJ14029.1
GntR family transcriptional regulator.
  
  
 0.699
AKJ13945.1
Hypothetical protein.
       0.680
AKJ13943.1
Alanine-rich protein.
       0.576
AKJ13944.1
Membrane protein.
       0.575
AKJ14177.1
GntR family transcriptional regulator.
  
  
 0.496
AKJ14251.1
GntR family transcriptional regulator.
  
  
 0.463
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.