Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKJ09672.1 | AKJ09674.1 | ABB07_06450 | ABB07_06460 | Protein meaA. | Dehydratase. | 0.945 |
| AKJ09672.1 | AKJ10089.1 | ABB07_06450 | ABB07_08650 | Protein meaA. | methylmalonyl-CoA mutase. | 0.995 |
| AKJ09672.1 | AKJ10090.1 | ABB07_06450 | ABB07_08655 | Protein meaA. | methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate. | 0.994 |
| AKJ09672.1 | AKJ11466.1 | ABB07_06450 | ABB07_15950 | Protein meaA. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.968 |
| AKJ09672.1 | AKJ13386.1 | ABB07_06450 | ABB07_26160 | Protein meaA. | acetyl-CoA carboxylase. | 0.863 |
| AKJ09672.1 | AKJ14015.1 | ABB07_06450 | ABB07_29415 | Protein meaA. | CoA-transferase; Belongs to the CoA-transferase III family. | 0.725 |
| AKJ09672.1 | sucC | ABB07_06450 | ABB07_14885 | Protein meaA. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.812 |
| AKJ09672.1 | sucD | ABB07_06450 | ABB07_14880 | Protein meaA. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.831 |
| AKJ09674.1 | AKJ09672.1 | ABB07_06460 | ABB07_06450 | Dehydratase. | Protein meaA. | 0.945 |
| AKJ09674.1 | AKJ11466.1 | ABB07_06460 | ABB07_15950 | Dehydratase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.723 |
| AKJ09674.1 | AKJ13386.1 | ABB07_06460 | ABB07_26160 | Dehydratase. | acetyl-CoA carboxylase. | 0.724 |
| AKJ09674.1 | AKJ14015.1 | ABB07_06460 | ABB07_29415 | Dehydratase. | CoA-transferase; Belongs to the CoA-transferase III family. | 0.676 |
| AKJ09674.1 | sucC | ABB07_06460 | ABB07_14885 | Dehydratase. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.878 |
| AKJ09674.1 | sucD | ABB07_06460 | ABB07_14880 | Dehydratase. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.875 |
| AKJ10089.1 | AKJ09672.1 | ABB07_08650 | ABB07_06450 | methylmalonyl-CoA mutase. | Protein meaA. | 0.995 |
| AKJ10089.1 | AKJ10090.1 | ABB07_08650 | ABB07_08655 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate. | 0.999 |
| AKJ10089.1 | AKJ11466.1 | ABB07_08650 | ABB07_15950 | methylmalonyl-CoA mutase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.968 |
| AKJ10089.1 | AKJ13386.1 | ABB07_08650 | ABB07_26160 | methylmalonyl-CoA mutase. | acetyl-CoA carboxylase. | 0.714 |
| AKJ10089.1 | AKJ14015.1 | ABB07_08650 | ABB07_29415 | methylmalonyl-CoA mutase. | CoA-transferase; Belongs to the CoA-transferase III family. | 0.725 |
| AKJ10089.1 | sucC | ABB07_08650 | ABB07_14885 | methylmalonyl-CoA mutase. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.933 |
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