Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09575.1 | AKJ10450.1 | ABB07_05945 | ABB07_10590 | Urea carboxylase. | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.512 |
AKJ09575.1 | AKJ11168.1 | ABB07_05945 | ABB07_14395 | Urea carboxylase. | Aldehyde dehydrogenase. | 0.819 |
AKJ09575.1 | AKJ13788.1 | ABB07_05945 | ABB07_28235 | Urea carboxylase. | Glutamate synthase. | 0.952 |
AKJ09575.1 | AKJ14252.1 | ABB07_05945 | ABB07_30625 | Urea carboxylase. | Glutamine synthetase. | 0.871 |
AKJ09575.1 | AKJ14253.1 | ABB07_05945 | ABB07_30630 | Urea carboxylase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.819 |
AKJ09575.1 | AKJ14254.1 | ABB07_05945 | ABB07_30635 | Urea carboxylase. | Short-chain dehydrogenase. | 0.559 |
AKJ09575.1 | AKJ14665.1 | ABB07_05945 | ABB07_32780 | Urea carboxylase. | Succinate-semialdehyde dehydrogenase. | 0.819 |
AKJ09575.1 | AKJ15595.1 | ABB07_05945 | ABB07_37695 | Urea carboxylase. | Polyketide synthase. | 0.993 |
AKJ10450.1 | AKJ09575.1 | ABB07_10590 | ABB07_05945 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Urea carboxylase. | 0.512 |
AKJ10450.1 | AKJ11168.1 | ABB07_10590 | ABB07_14395 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aldehyde dehydrogenase. | 0.663 |
AKJ10450.1 | AKJ13788.1 | ABB07_10590 | ABB07_28235 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase. | 0.866 |
AKJ10450.1 | AKJ14250.1 | ABB07_10590 | ABB07_30615 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamine amidotransferase. | 0.549 |
AKJ10450.1 | AKJ14253.1 | ABB07_10590 | ABB07_30630 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.817 |
AKJ10450.1 | AKJ14665.1 | ABB07_10590 | ABB07_32780 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Succinate-semialdehyde dehydrogenase. | 0.933 |
AKJ10450.1 | AKJ15595.1 | ABB07_10590 | ABB07_37695 | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Polyketide synthase. | 0.794 |
AKJ11168.1 | AKJ09575.1 | ABB07_14395 | ABB07_05945 | Aldehyde dehydrogenase. | Urea carboxylase. | 0.819 |
AKJ11168.1 | AKJ10450.1 | ABB07_14395 | ABB07_10590 | Aldehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.663 |
AKJ11168.1 | AKJ13788.1 | ABB07_14395 | ABB07_28235 | Aldehyde dehydrogenase. | Glutamate synthase. | 0.846 |
AKJ11168.1 | AKJ14250.1 | ABB07_14395 | ABB07_30615 | Aldehyde dehydrogenase. | Glutamine amidotransferase. | 0.422 |
AKJ11168.1 | AKJ14252.1 | ABB07_14395 | ABB07_30625 | Aldehyde dehydrogenase. | Glutamine synthetase. | 0.434 |
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