STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ14329.1Acetyltransferase. (274 aa)    
Predicted Functional Partners:
AKJ14327.1
Chloride transporter.
       0.792
AKJ14328.1
Class IV aminotransferase.
       0.792
AKJ12249.1
Asparagine synthase.
 
 
  0.643
AKJ11345.1
Peptidase M22.
  
 0.542
AKJ14343.1
Hypothetical protein.
  
     0.531
AKJ09575.1
Urea carboxylase.
   
  0.528
AKJ14386.1
Hypothetical protein.
  
     0.528
AKJ10326.1
Membrane protein.
  
     0.489
ureAB
Urease subunit gamma; In the C-terminal section; belongs to the urease beta subunit family.
  
 
  0.459
AKJ12083.1
Alanine racemase.
 
  
  0.448
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.