STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ14333.1Sporulation protein SsgA. (137 aa)    
Predicted Functional Partners:
AKJ14390.1
XRE family transcriptional regulator.
  
   
 0.787
AKJ14334.1
Membrane protein.
       0.771
AKJ10971.1
Hypothetical protein.
  
     0.756
AKJ14332.1
Hypothetical protein.
       0.731
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.713
AKJ10884.1
Anti-sigma regulatory factor.
  
     0.683
AKJ13996.1
Transcriptional regulator.
  
   
 0.683
AKJ10528.1
NsdA.
  
     0.669
AKJ13673.1
RNA-binding protein.
  
     0.644
AKJ12544.1
XRE family transcriptional regulator.
  
     0.631
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.