STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ14518.1ABC transporter substrate-binding protein. (431 aa)    
Predicted Functional Partners:
AKJ14519.1
Sugar ABC transporter permease.
 
 0.994
AKJ14520.1
Thiamine ABC transporter ATP-binding protein.
 
 0.994
AKJ12974.1
Sugar ABC transporter permease.
 
 0.937
AKJ12365.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.934
AKJ14144.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.934
AKJ09331.1
ABC transporter permease.
 
 0.931
AKJ09330.1
ABC transporter permease.
 
  0.927
AKJ10040.1
ABC transporter permease.
 
 0.910
AKJ12975.1
ABC transporter permease.
 
  0.906
AKJ10039.1
Sugar ABC transporter permease.
 
 0.905
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.