STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ14658.1TetR family transcriptional regulator. (214 aa)    
Predicted Functional Partners:
AKJ14659.1
acyl-CoA dehydrogenase.
       0.777
AKJ13587.1
TetR family transcriptional regulator.
  
     0.731
AKJ10831.1
TetR family transcriptional regulator.
  
     0.711
AKJ14451.1
TetR family transcriptional regulator.
  
     0.680
AKJ13670.1
AsnC family transcriptional regulator.
  
   
 0.557
AKJ09095.1
TetR family transcriptional regulator.
  
     0.492
AKJ12024.1
Hypothetical protein.
  
     0.470
AKJ13444.1
Hypothetical protein.
  
     0.468
AKJ10735.1
MarR family transcriptional regulator.
  
   
 0.457
AKJ09662.1
Polyketide cyclase.
      
 0.455
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.