Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09828.1 | AKJ14675.1 | ABB07_07280 | ABB07_32830 | Malate synthase; Belongs to the malate synthase family. | UDP-glucose 4-epimerase. | 0.438 |
AKJ09828.1 | AKJ14681.1 | ABB07_07280 | ABB07_32860 | Malate synthase; Belongs to the malate synthase family. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | 0.443 |
AKJ09828.1 | acsA | ABB07_07280 | ABB07_17385 | Malate synthase; Belongs to the malate synthase family. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.952 |
AKJ09931.1 | AKJ14675.1 | ABB07_07825 | ABB07_32830 | Diguanylate cyclase. | UDP-glucose 4-epimerase. | 0.568 |
AKJ09931.1 | AKJ14681.1 | ABB07_07825 | ABB07_32860 | Diguanylate cyclase. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | 0.491 |
AKJ14674.1 | AKJ14675.1 | ABB07_32825 | ABB07_32830 | Hypothetical protein. | UDP-glucose 4-epimerase. | 0.611 |
AKJ14675.1 | AKJ09828.1 | ABB07_32830 | ABB07_07280 | UDP-glucose 4-epimerase. | Malate synthase; Belongs to the malate synthase family. | 0.438 |
AKJ14675.1 | AKJ09931.1 | ABB07_32830 | ABB07_07825 | UDP-glucose 4-epimerase. | Diguanylate cyclase. | 0.568 |
AKJ14675.1 | AKJ14674.1 | ABB07_32830 | ABB07_32825 | UDP-glucose 4-epimerase. | Hypothetical protein. | 0.611 |
AKJ14675.1 | AKJ14676.1 | ABB07_32830 | ABB07_32835 | UDP-glucose 4-epimerase. | Glyoxalase. | 0.618 |
AKJ14675.1 | AKJ14681.1 | ABB07_32830 | ABB07_32860 | UDP-glucose 4-epimerase. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | 0.802 |
AKJ14675.1 | AKJ14682.1 | ABB07_32830 | ABB07_32865 | UDP-glucose 4-epimerase. | Transcriptional regulator. | 0.838 |
AKJ14675.1 | acsA | ABB07_32830 | ABB07_17385 | UDP-glucose 4-epimerase. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.455 |
AKJ14676.1 | AKJ14675.1 | ABB07_32835 | ABB07_32830 | Glyoxalase. | UDP-glucose 4-epimerase. | 0.618 |
AKJ14681.1 | AKJ09828.1 | ABB07_32860 | ABB07_07280 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | Malate synthase; Belongs to the malate synthase family. | 0.443 |
AKJ14681.1 | AKJ09931.1 | ABB07_32860 | ABB07_07825 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | Diguanylate cyclase. | 0.491 |
AKJ14681.1 | AKJ14675.1 | ABB07_32860 | ABB07_32830 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | UDP-glucose 4-epimerase. | 0.802 |
AKJ14681.1 | AKJ14682.1 | ABB07_32860 | ABB07_32865 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | Transcriptional regulator. | 0.860 |
AKJ14681.1 | acsA | ABB07_32860 | ABB07_17385 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.789 |
AKJ14682.1 | AKJ14675.1 | ABB07_32865 | ABB07_32830 | Transcriptional regulator. | UDP-glucose 4-epimerase. | 0.838 |
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