STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Belongs to the xylose isomerase family. (388 aa)    
Predicted Functional Partners:
xylB
Xylulose kinase.
 
 
 0.998
AKJ13364.1
Sugar kinase; Belongs to the FGGY kinase family.
 
 
 0.983
AKJ14686.1
ROK family protein.
 
  
 0.952
AKJ12576.1
PTS lactose transporter subunit IIC.
     
 0.951
AKJ12761.1
PTS fructose transporter subunit IIC.
     
 0.951
AKJ15158.1
Levanase; Belongs to the glycosyl hydrolase 32 family.
  
  
 0.918
AKJ13871.1
Sugar kinase.
 
  
 0.917
AKJ09914.1
Beta-galactosidase.
 
  
 0.915
AKJ10263.1
Dehydrogenase.
     
 0.906
AKJ13411.1
Dehydrogenase.
     
 0.906
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.