STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ14783.1Aldolase; Belongs to the HpcH/HpaI aldolase family. (432 aa)    
Predicted Functional Partners:
AKJ11059.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.862
AKJ11466.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.826
AKJ09575.1
Urea carboxylase.
  
 
 0.825
AKJ09851.1
OHCU decarboxylase.
 
     0.792
AKJ09849.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
     0.786
AKJ13386.1
acetyl-CoA carboxylase.
    
 0.782
AKJ09850.1
Hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.770
AKJ09824.1
Allantoicase.
 
    0.769
AKJ11212.1
OHCU decarboxylase.
 
     0.761
AKJ14782.1
Electron transfer flavoprotein subunit alpha.
  
    0.760
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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