Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09717.1 | AKJ12994.1 | ABB07_06680 | ABB07_24050 | Hypothetical protein. | Hypothetical protein. | 0.466 |
AKJ09717.1 | AKJ13788.1 | ABB07_06680 | ABB07_28235 | Hypothetical protein. | Glutamate synthase. | 0.881 |
AKJ09717.1 | AKJ13964.1 | ABB07_06680 | ABB07_29155 | Hypothetical protein. | Multidrug DMT transporter permease. | 0.466 |
AKJ09717.1 | AKJ14883.1 | ABB07_06680 | ABB07_33955 | Hypothetical protein. | Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.817 |
AKJ09717.1 | AKJ15344.1 | ABB07_06680 | ABB07_36380 | Hypothetical protein. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.441 |
AKJ09717.1 | AKJ15595.1 | ABB07_06680 | ABB07_37695 | Hypothetical protein. | Polyketide synthase. | 0.999 |
AKJ10788.1 | AKJ13788.1 | ABB07_12405 | ABB07_28235 | Homoserine dehydrogenase. | Glutamate synthase. | 0.782 |
AKJ10788.1 | AKJ14883.1 | ABB07_12405 | ABB07_33955 | Homoserine dehydrogenase. | Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.808 |
AKJ12994.1 | AKJ09717.1 | ABB07_24050 | ABB07_06680 | Hypothetical protein. | Hypothetical protein. | 0.466 |
AKJ12994.1 | AKJ13964.1 | ABB07_24050 | ABB07_29155 | Hypothetical protein. | Multidrug DMT transporter permease. | 0.918 |
AKJ12994.1 | AKJ14883.1 | ABB07_24050 | ABB07_33955 | Hypothetical protein. | Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.794 |
AKJ12994.1 | AKJ15595.1 | ABB07_24050 | ABB07_37695 | Hypothetical protein. | Polyketide synthase. | 0.459 |
AKJ12994.1 | ectA | ABB07_24050 | ABB07_29170 | Hypothetical protein. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.832 |
AKJ12994.1 | ectC | ABB07_24050 | ABB07_29160 | Hypothetical protein. | L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. | 0.978 |
AKJ13788.1 | AKJ09717.1 | ABB07_28235 | ABB07_06680 | Glutamate synthase. | Hypothetical protein. | 0.881 |
AKJ13788.1 | AKJ10788.1 | ABB07_28235 | ABB07_12405 | Glutamate synthase. | Homoserine dehydrogenase. | 0.782 |
AKJ13788.1 | AKJ14883.1 | ABB07_28235 | ABB07_33955 | Glutamate synthase. | Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.866 |
AKJ13788.1 | AKJ15344.1 | ABB07_28235 | ABB07_36380 | Glutamate synthase. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.980 |
AKJ13788.1 | AKJ15595.1 | ABB07_28235 | ABB07_37695 | Glutamate synthase. | Polyketide synthase. | 0.944 |
AKJ13788.1 | gcvP | ABB07_28235 | ABB07_31960 | Glutamate synthase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.991 |
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