Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09626.1 | AKJ14920.1 | ABB07_06220 | ABB07_34155 | Diguanylate cyclase. | Strictosidine synthase. | 0.576 |
AKJ09869.1 | AKJ14920.1 | ABB07_07490 | ABB07_34155 | Catalase; Belongs to the catalase family. | Strictosidine synthase. | 0.550 |
AKJ09926.1 | AKJ13665.1 | ABB07_07790 | ABB07_27605 | Crp/Fnr family transcriptional regulator. | Cystathionine beta-lyase. | 0.853 |
AKJ09926.1 | AKJ14920.1 | ABB07_07790 | ABB07_34155 | Crp/Fnr family transcriptional regulator. | Strictosidine synthase. | 0.701 |
AKJ13665.1 | AKJ09926.1 | ABB07_27605 | ABB07_07790 | Cystathionine beta-lyase. | Crp/Fnr family transcriptional regulator. | 0.853 |
AKJ13665.1 | AKJ14920.1 | ABB07_27605 | ABB07_34155 | Cystathionine beta-lyase. | Strictosidine synthase. | 0.556 |
AKJ14919.1 | AKJ14920.1 | ABB07_34150 | ABB07_34155 | Transcriptional regulator, ArsR family protein. | Strictosidine synthase. | 0.626 |
AKJ14919.1 | AKJ14922.1 | ABB07_34150 | ABB07_34165 | Transcriptional regulator, ArsR family protein. | Hypothetical protein. | 0.759 |
AKJ14919.1 | AKJ14925.1 | ABB07_34150 | ABB07_34180 | Transcriptional regulator, ArsR family protein. | GntR family transcriptional regulator. | 0.670 |
AKJ14919.1 | crcB | ABB07_34150 | ABB07_34160 | Transcriptional regulator, ArsR family protein. | Chromosome condensation protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.763 |
AKJ14919.1 | crcB-2 | ABB07_34150 | ABB07_34170 | Transcriptional regulator, ArsR family protein. | Chromosome condensation protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.763 |
AKJ14919.1 | uppP | ABB07_34150 | ABB07_34175 | Transcriptional regulator, ArsR family protein. | UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.708 |
AKJ14920.1 | AKJ09626.1 | ABB07_34155 | ABB07_06220 | Strictosidine synthase. | Diguanylate cyclase. | 0.576 |
AKJ14920.1 | AKJ09869.1 | ABB07_34155 | ABB07_07490 | Strictosidine synthase. | Catalase; Belongs to the catalase family. | 0.550 |
AKJ14920.1 | AKJ09926.1 | ABB07_34155 | ABB07_07790 | Strictosidine synthase. | Crp/Fnr family transcriptional regulator. | 0.701 |
AKJ14920.1 | AKJ13665.1 | ABB07_34155 | ABB07_27605 | Strictosidine synthase. | Cystathionine beta-lyase. | 0.556 |
AKJ14920.1 | AKJ14919.1 | ABB07_34155 | ABB07_34150 | Strictosidine synthase. | Transcriptional regulator, ArsR family protein. | 0.626 |
AKJ14920.1 | AKJ14922.1 | ABB07_34155 | ABB07_34165 | Strictosidine synthase. | Hypothetical protein. | 0.803 |
AKJ14920.1 | AKJ14925.1 | ABB07_34155 | ABB07_34180 | Strictosidine synthase. | GntR family transcriptional regulator. | 0.680 |
AKJ14920.1 | crcB | ABB07_34155 | ABB07_34160 | Strictosidine synthase. | Chromosome condensation protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.803 |
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