Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ11243.1 | AKJ12021.1 | ABB07_14770 | ABB07_18855 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Phenylacetic acid degradation protein. | 0.604 |
AKJ11243.1 | AKJ14994.1 | ABB07_14770 | ABB07_34540 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.816 |
AKJ11243.1 | AKJ15570.1 | ABB07_14770 | ABB07_37560 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | AMP-dependent synthetase. | 0.626 |
AKJ12017.1 | AKJ12019.1 | ABB07_18835 | ABB07_18845 | phenylacetate-CoA oxygenase. | Phenylacetic acid degradation protein. | 0.998 |
AKJ12017.1 | AKJ12020.1 | ABB07_18835 | ABB07_18850 | phenylacetate-CoA oxygenase. | Phenylacetic acid degradation protein PaaD. | 0.997 |
AKJ12017.1 | AKJ12021.1 | ABB07_18835 | ABB07_18855 | phenylacetate-CoA oxygenase. | Phenylacetic acid degradation protein. | 0.998 |
AKJ12017.1 | AKJ14994.1 | ABB07_18835 | ABB07_34540 | phenylacetate-CoA oxygenase. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.988 |
AKJ12017.1 | AKJ15570.1 | ABB07_18835 | ABB07_37560 | phenylacetate-CoA oxygenase. | AMP-dependent synthetase. | 0.926 |
AKJ12017.1 | paaB | ABB07_18835 | ABB07_18840 | phenylacetate-CoA oxygenase. | phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation. | 0.999 |
AKJ12019.1 | AKJ12017.1 | ABB07_18845 | ABB07_18835 | Phenylacetic acid degradation protein. | phenylacetate-CoA oxygenase. | 0.998 |
AKJ12019.1 | AKJ12020.1 | ABB07_18845 | ABB07_18850 | Phenylacetic acid degradation protein. | Phenylacetic acid degradation protein PaaD. | 0.998 |
AKJ12019.1 | AKJ12021.1 | ABB07_18845 | ABB07_18855 | Phenylacetic acid degradation protein. | Phenylacetic acid degradation protein. | 0.998 |
AKJ12019.1 | AKJ14994.1 | ABB07_18845 | ABB07_34540 | Phenylacetic acid degradation protein. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.988 |
AKJ12019.1 | AKJ15570.1 | ABB07_18845 | ABB07_37560 | Phenylacetic acid degradation protein. | AMP-dependent synthetase. | 0.925 |
AKJ12019.1 | paaB | ABB07_18845 | ABB07_18840 | Phenylacetic acid degradation protein. | phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation. | 0.999 |
AKJ12020.1 | AKJ12017.1 | ABB07_18850 | ABB07_18835 | Phenylacetic acid degradation protein PaaD. | phenylacetate-CoA oxygenase. | 0.997 |
AKJ12020.1 | AKJ12019.1 | ABB07_18850 | ABB07_18845 | Phenylacetic acid degradation protein PaaD. | Phenylacetic acid degradation protein. | 0.998 |
AKJ12020.1 | AKJ12021.1 | ABB07_18850 | ABB07_18855 | Phenylacetic acid degradation protein PaaD. | Phenylacetic acid degradation protein. | 0.998 |
AKJ12020.1 | AKJ14994.1 | ABB07_18850 | ABB07_34540 | Phenylacetic acid degradation protein PaaD. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.990 |
AKJ12020.1 | AKJ15570.1 | ABB07_18850 | ABB07_37560 | Phenylacetic acid degradation protein PaaD. | AMP-dependent synthetase. | 0.926 |
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