Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ09152.1 | AKJ10370.1 | ABB07_03670 | ABB07_10165 | Thioredoxin. | Histidine kinase. | 0.870 |
AKJ09152.1 | AKJ15087.1 | ABB07_03670 | ABB07_35025 | Thioredoxin. | Chemotaxis protein CheY. | 0.988 |
AKJ09564.1 | AKJ10370.1 | ABB07_05890 | ABB07_10165 | Histidine kinase. | Histidine kinase. | 0.999 |
AKJ09564.1 | AKJ12382.1 | ABB07_05890 | ABB07_20815 | Histidine kinase. | Diguanylate cyclase. | 0.911 |
AKJ09564.1 | AKJ12486.1 | ABB07_05890 | ABB07_21375 | Histidine kinase. | Hypothetical protein. | 0.985 |
AKJ09564.1 | AKJ15086.1 | ABB07_05890 | ABB07_35020 | Histidine kinase. | Histidine kinase. | 0.898 |
AKJ09564.1 | AKJ15087.1 | ABB07_05890 | ABB07_35025 | Histidine kinase. | Chemotaxis protein CheY. | 0.979 |
AKJ10370.1 | AKJ09152.1 | ABB07_10165 | ABB07_03670 | Histidine kinase. | Thioredoxin. | 0.870 |
AKJ10370.1 | AKJ09564.1 | ABB07_10165 | ABB07_05890 | Histidine kinase. | Histidine kinase. | 0.999 |
AKJ10370.1 | AKJ10703.1 | ABB07_10165 | ABB07_11975 | Histidine kinase. | Thioredoxin; Belongs to the thioredoxin family. | 0.870 |
AKJ10370.1 | AKJ10722.1 | ABB07_10165 | ABB07_12070 | Histidine kinase. | Thioredoxin. | 0.870 |
AKJ10370.1 | AKJ12068.1 | ABB07_10165 | ABB07_19115 | Histidine kinase. | Thioredoxin; Belongs to the thioredoxin family. | 0.870 |
AKJ10370.1 | AKJ12382.1 | ABB07_10165 | ABB07_20815 | Histidine kinase. | Diguanylate cyclase. | 0.999 |
AKJ10370.1 | AKJ12486.1 | ABB07_10165 | ABB07_21375 | Histidine kinase. | Hypothetical protein. | 0.999 |
AKJ10370.1 | AKJ15086.1 | ABB07_10165 | ABB07_35020 | Histidine kinase. | Histidine kinase. | 0.999 |
AKJ10370.1 | AKJ15087.1 | ABB07_10165 | ABB07_35025 | Histidine kinase. | Chemotaxis protein CheY. | 0.999 |
AKJ10703.1 | AKJ10370.1 | ABB07_11975 | ABB07_10165 | Thioredoxin; Belongs to the thioredoxin family. | Histidine kinase. | 0.870 |
AKJ10703.1 | AKJ15087.1 | ABB07_11975 | ABB07_35025 | Thioredoxin; Belongs to the thioredoxin family. | Chemotaxis protein CheY. | 0.982 |
AKJ10722.1 | AKJ10370.1 | ABB07_12070 | ABB07_10165 | Thioredoxin. | Histidine kinase. | 0.870 |
AKJ10722.1 | AKJ15087.1 | ABB07_12070 | ABB07_35025 | Thioredoxin. | Chemotaxis protein CheY. | 0.981 |
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