STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ15201.1Membrane protein. (341 aa)    
Predicted Functional Partners:
AKJ10370.1
Histidine kinase.
 
 0.984
AKJ12686.1
Membrane protein.
 
 0.897
AKJ15200.1
Serine/threonine protein phosphatase.
 
 
 0.892
AKJ09564.1
Histidine kinase.
 
 
 0.849
AKJ10407.1
Hypothetical protein.
  
 0.837
AKJ10648.1
Hypothetical protein.
  
 0.837
AKJ11770.1
Type VII secretion protein.
  
 0.837
AKJ15087.1
Chemotaxis protein CheY.
  
 0.832
AKJ12486.1
Hypothetical protein.
  
 0.809
AKJ11466.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.793
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.