STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ15341.1Glycine/betaine ABC transporter ATP-binding protein. (367 aa)    
Predicted Functional Partners:
AKJ11240.1
Glycine/betaine ABC transporter permease.
 0.999
AKJ15342.1
ABC transporter permease.
 0.999
AKJ15343.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 0.999
AKJ11239.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 0.998
AKJ15340.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.767
AKJ09983.1
ABC transporter permease.
  
 0.697
AKJ15338.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
   
 0.688
AKJ09984.1
ABC transporter permease.
 
  
 0.675
AKJ09744.1
Hypothetical protein.
 
  
 0.668
AKJ15344.1
Sarcosine dehydrogenase; Belongs to the GcvT family.
 
    0.652
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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