STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ15474.1Hydrolase. (297 aa)    
Predicted Functional Partners:
AKJ12341.1
Hypothetical protein.
  
  0.738
AKJ09905.1
Cellulose-binding protein.
  
 0.691
AKJ09415.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.583
AKJ15475.1
Transcriptional regulator, Fis family protein.
 
     0.530
AKJ10025.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.496
AKJ09174.1
Kanamycin biosynthetic protein.
   
  0.494
AKJ10329.1
Collagen triple helix repeat-containing protein.
   
  0.494
AKJ11360.1
Membrane protein.
   
  0.494
AKJ11612.1
Hypothetical protein.
   
  0.494
AKJ11885.1
Hypothetical protein.
   
  0.494
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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