STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ15485.1Hypothetical protein. (243 aa)    
Predicted Functional Partners:
AKJ15166.1
Dienelactone hydrolase.
  
  
 
0.856
AKJ08519.1
Hypothetical protein.
  
 
 0.822
AKJ08521.1
Maleylacetate reductase.
  
 
 0.822
AKJ13404.1
Protocatechuate dioxygenase.
   
 
  0.810
AKJ08520.1
6-chlorohydroxyquinol-1,2-dioxygenase.
   
 
  0.678
AKJ15484.1
3-hydroxybenzoate 6-hydroxylase.
  
    0.591
AKJ09415.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.590
AKJ10025.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.590
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.498
AKJ09557.1
Phosphoesterase.
  
 
 0.452
Your Current Organism:
Streptomyces incarnatus
NCBI taxonomy Id: 665007
Other names: S. incarnatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.