STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxAThioredoxin M-type, chloroplast precursor (Trx-M); Thioredoxin-like fold, Thioredoxin, thioredoxin: thioredoxin; Belongs to the thioredoxin family. (109 aa)    
Predicted Functional Partners:
trxB
Thioredoxin reductase, Pyridine nucleotide-disulphide oxidoreductase.
 
 0.993
wzzE
Lipopolysaccharide biosynthesis protein wzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
     
 0.711
rho
Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
  
  
 0.673
putA
Proline dehydrogenase, P5C dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
    
 
 0.673
cysH
3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
   0.654
fpr
Ferredoxin-NAD(+) reductase.
      
 0.645
aHP1
Putative peroxiredoxin/glutaredoxin family protein; Hybrid peroxiredoxin hyPrx5 (Thioredoxin reductase), Thioredoxin fold, Redoxin, GlrX-dom: Glutaredoxin-family domain.
   
 
 0.628
fur
Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family.
  
 
 0.614
amsI
Low molecular weight protein-tyrosine-phosphatase wzb, Amylovoran biosynthesis protein amsI.
  
 
 0.613
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); 2-dehydro-3-deoxyphosphooctonate aldolase (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS); Belongs to the KdsA family.
      
 0.604
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.