STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAMY_0403Hypothetical protein; Plasmid stabilization system, Plasmid stabilisation system protein. (91 aa)    
Predicted Functional Partners:
EAMY_0402
Uncharacterized protein y4kO; CopG-like DNA-binding.
 
 
 0.991
putA
Proline dehydrogenase, P5C dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 
 0.840
relB
RelB antitoxin, RelB_DinJ: addiction module antitoxin, RelB/DinJ family.
   
   0.686
EAMY_0401
Hypothetical protein.
 
     0.644
yeeU
Uncharacterized protein yfjZ; YagBYeeUYfjZ, YagB/YeeU/YfjZ family.
     
 0.416
yjjJ
Uncharacterized protein yjjJ; HipA-like, N-terminal, HipA-like N-terminal domain.
  
   
 0.405
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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