STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galRHTH-type transcriptional repressor purR (Purine nucleotide synthesis repressor) (Pur regulon repressor), Periplasmic binding protein/LacI transcriptional regulator, Periplasmic binding proteins and sugar binding domain of the LacI family, ccpA: catabolite control protein A. (334 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (UDP-glucose-hexose-1-phosphate uridylyltransferase).
 
   
 0.817
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.800
galM
Galactose-1-epimerase (mutarotase); Converts alpha-aldose to the beta-anomer.
     
 0.785
gltB
Glutamate synthase.
    
 
 0.695
galE
UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase); Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.666
EAMY_0666
Hypothetical protein predicted by Glimmer/Critica.
       0.572
bisC1
Putative biotin sulfoxide reductas2; Dimethyl sulfoxide/trimethylamine N-oxide reductase precursor (DMSO reductase) (DMSOR), Molybdopterin oxidoreductase.
       0.525
bisC3
Putative biotin sulfoxide reductas2; Trimethylamine-N-oxide reductase precursor (TMAO reductase) (Trimethylamine oxidase), Aspartate decarboxylase-like fold, Molydopterin dinucleotide binding domain, bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.525
rpoD
RNA polymerase sigma factor rpoD (Sigma-70); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
      
 0.522
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 0.488
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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