STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
barASensor histidine kinase/response regulator; Signal transduction histidine-protein kinase barA, Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, phoR_proteo: phosphate regulon sensor kinase PhoR. (909 aa)    
Predicted Functional Partners:
uvrY
Putative 2-component transcriptional regulator UvrY.
 
 0.998
arcB
Aerobic respiration control hybrid signal transduction histidine kinase ArcB, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, sensory_box: PAS domain S-box.
 
 
0.990
hmsT
Uncharacterized protein yhcK; GGDEF, GGDEF domain, GGDEF: diguanylate cyclase (GGDEF) domain.
 
 0.990
rcsC1
Two component sensor kinase/response regulator protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
 
0.988
aer
Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
 
 0.986
yojN
Putative two-component system sensor kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
 
 
0.985
cheV
Putative chemotaxis signal transduction protein, CheW-like domain.
  
 
 0.983
yhjK3
Protein yhjK; EAL, EAL domain.
  
 0.980
hrpX
Two-component sensor kinase, ATP-binding region, ATPase-like, Histidine kinase, sensory_box: PAS domain S-box.
 
 0.977
yhdA
Uncharacterized protein yhdA; EAL, EAL domain, GGDEF: diguanylate cyclase (GGDEF) domain.
 
  
 0.975
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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